Introduction

Introduction of the Cafe framework — how cell fate prediction works and how Cafe's data model, wrapper system, plotting, and benchmarking fit together.

1. Cell Fate Prediction: Problem statement, Cafe's architecture, and the end-to-end task flow.
2. Data Structures: FateAnnData, MilestoneWrapper, and WaypointWrapper.
3. Wrapper Types :
4. Trajectory Visualization:
5. Metrics and Benchmark:
6. Downstream Analysis: